E. caballus Gene: PDLIM7 - ENSECAG00000022511 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000022511
NamePDLIM7
DescriptionPDZ and LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:22958]
OrganismEquus caballus (horse)
Synonym(s)enigma

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
470
  • 470
  • 628
97.97
  • 97.97
  • 97.28
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
684
  • 684
97.04
  • 97.04
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
701
  • 701
96.96
  • 96.96
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.05e3
  • 1.05e3
  • 1.39e3
95.46
  • 95.46
  • 93.96
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.07e3
  • 1.07e3
95.36
  • 95.36
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.10e3
  • 1.10e3
  • 2.35e3
95.23
  • 95.23
  • 89.81
AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.28e3
  • 1.28e3
94.47
  • 94.47
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.46e3
  • 1.46e3
93.67
  • 93.67
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.69e3
  • 1.69e3
92.69
  • 92.69
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
2.16e3
  • 2.16e3
90.64
  • 90.64
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
3.14e3
  • 3.14e3
86.38
  • 86.38
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
3.56e3
  • 3.56e3
84.58
  • 84.58
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
3.58e3
  • 3.58e3
  • 7.16e3
  • 7.54e3
  • 1.01e4
84.49
  • 84.49
  • 68.97
  • 67.29
  • 56.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
4.52e3
  • 4.52e3
80.42
  • 80.42
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
5.15e3
  • 5.15e3
77.67
  • 77.67
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
5.46e3
  • 5.46e3
76.32
  • 76.32
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
6.10e3
  • 6.10e3
73.53
  • 73.53
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
6.84e3
  • 6.84e3
70.35
  • 70.35
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
7.52e3
  • 7.52e3
67.39
  • 67.39
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.80e3
  • 7.80e3
66.17
  • 66.17
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.57e3
  • 9.57e3
  • 1.00e4
58.52
  • 58.52
  • 56.64
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.18e4
  • 1.18e4
  • 1.19e4
48.66
  • 48.66
  • 48.49
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.23e4
  • 1.23e4
46.69
  • 46.69
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000022511 (PDLIM7)
HGNCHGNC:22958 (PDLIM7)
Uniprot/SPTREMBLF7BSH5, F7BSH5_HORSE

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