We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

E. caballus Gene: PDE1B - ENSECAG00000022552 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000022552
NamePDE1B
Descriptionphosphodiesterase 1B [Source:HGNC Symbol;Acc:HGNC:8775]
OrganismEquus caballus (horse)
Synonym(s)pdes1b
Orthologs(s)16 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.95e3
  • 2.95e3
87.23
  • 87.23
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.34e3
  • 3.34e3
  • 7.72e3
85.53
  • 85.53
  • 66.52
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
6.02e3
  • 6.02e3
73.91
  • 73.91
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
6.42e3
  • 6.42e3
72.16
  • 72.16
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
7.11e3
  • 7.11e3
  • 8.77e3
  • 1.01e4
  • 1.02e4
69.16
  • 69.16
  • 61.99
  • 56.34
  • 55.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
7.20e3
  • 7.20e3
68.80
  • 68.80
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
7.30e3
  • 7.30e3
  • 7.93e3
68.36
  • 68.36
  • 65.61
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.63e3
  • 7.63e3
  • 7.94e3
66.92
  • 66.92
  • 65.57
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
7.73e3
  • 7.73e3
  • 8.27e3
66.49
  • 66.49
  • 64.13
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
8.74e3
  • 8.74e3
62.12
  • 62.12
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
8.91e3
  • 8.91e3
61.38
  • 61.38
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
9.17e3
  • 9.17e3
60.27
  • 60.27
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
9.25e3
  • 9.25e3
59.88
  • 59.88
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.26e3
  • 9.26e3
  • 9.48e3
59.86
  • 59.86
  • 58.89
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
9.66e3
  • 9.66e3
58.13
  • 58.13
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
9.85e3
  • 9.85e3
57.30
  • 57.30
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
9.99e3
  • 9.99e3
56.70
  • 56.70
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
55.24
  • 55.24
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
51.50
  • 51.50
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
51.20
  • 51.20
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
48.18
  • 48.18
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.38e4
  • 1.38e4
40.20
  • 40.20
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSECAG00000022552.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSECAG00000022552.

Cross-references

EnsemblENSECAG00000022552 (PDE1B)
HGNCHGNC:8775 (PDE1B)
Uniprot/SPTREMBLF6VSW2, F6VSW2_HORSE

Do not show this banner again