E. caballus Gene: PRPF38A - ENSECAG00000022628 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000022628
NamePRPF38A
Descriptionpre-mRNA processing factor 38A [Source:HGNC Symbol;Acc:HGNC:25930]
OrganismEquus caballus (horse)
Synonym(s)flj14936, prp38

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.34e3
  • 1.34e3
94.19
  • 94.19
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.75e3
  • 1.75e3
92.42
  • 92.42
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.80e3
  • 1.80e3
  • 2.05e3
92.20
  • 92.20
  • 91.11
AEIR
  • AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.91e3
  • 1.91e3
91.72
  • 91.72
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.05e3
  • 2.05e3
  • 3.73e3
  • 4.31e3
  • 4.71e3
91.12
  • 91.12
  • 83.84
  • 81.29
  • 79.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
2.49e3
  • 2.49e3
89.22
  • 89.22
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
2.90e3
  • 2.90e3
87.44
  • 87.44
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
2.96e3
  • 2.96e3
87.15
  • 87.15
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
3.02e3
  • 3.02e3
86.90
  • 86.90
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
3.13e3
  • 3.13e3
86.42
  • 86.42
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
3.17e3
  • 3.17e3
86.27
  • 86.27
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.63e3
  • 3.63e3
  • 4.28e3
84.25
  • 84.25
  • 81.45
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.65e3
  • 3.65e3
  • 5.27e3
84.18
  • 84.18
  • 77.14
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
3.79e3
  • 3.79e3
83.57
  • 83.57
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.84e3
  • 3.84e3
  • 4.08e3
83.34
  • 83.34
  • 82.30
AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
4.07e3
  • 4.07e3
82.33
  • 82.33
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.18e3
  • 4.18e3
  • 4.57e3
81.88
  • 81.88
  • 80.18
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
4.34e3
  • 4.34e3
81.19
  • 81.19
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
4.76e3
  • 4.76e3
79.34
  • 79.34
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
4.90e3
  • 4.90e3
78.77
  • 78.77
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
5.07e3
  • 5.07e3
77.99
  • 77.99
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
5.20e3
  • 5.20e3
77.46
  • 77.46
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000022628 (PRPF38A)
HGNCHGNC:25930 (PRPF38A)
Uniprot/SPTREMBLF6UQW2, F6UQW2_HORSE

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