E. caballus Gene: SCG5 - ENSECAG00000022874 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000022874
NameSCG5
Descriptionsecretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]
OrganismEquus caballus (horse)
Synonym(s)7b2, sgne1, sgv

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
340
  • 340
98.53
  • 98.53
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
649
  • 649
  • 893
97.19
  • 97.19
  • 96.13
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
651
  • 651
  • 1.01e3
97.18
  • 97.18
  • 95.64
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.12e3
  • 1.12e3
95.13
  • 95.13
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
2.24e3
  • 2.24e3
90.28
  • 90.28
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
3.02e3
  • 3.02e3
86.92
  • 86.92
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
4.11e3
  • 4.11e3
82.17
  • 82.17
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
6.82e3
  • 6.82e3
70.42
  • 70.42
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
8.82e3
  • 8.82e3
  • 1.15e4
  • 1.21e4
  • 1.35e4
61.74
  • 61.74
  • 50.21
  • 47.59
  • 41.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
9.13e3
  • 9.13e3
60.39
  • 60.39
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
52.38
  • 52.38
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
  • 1.16e4
50.80
  • 50.80
  • 49.70
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
46.14
  • 46.14
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
45.66
  • 45.66
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
44.89
  • 44.89
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
39.52
  • 39.52
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.57e4
  • 1.57e4
31.74
  • 31.74
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
29.78
  • 29.78
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.76e4
  • 1.76e4
  • 1.85e4
23.81
  • 23.81
  • 19.82
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000022874 (SCG5)
HGNCHGNC:10816 (SCG5)
Uniprot/SPTREMBLF6VTN3, F6VTN3_HORSE

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