E. caballus Gene: SIX1 - ENSECAG00000022919 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000022919
NameSIX1
DescriptionSIX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:10887]
OrganismEquus caballus (horse)
Synonym(s)dfna23

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.85e3
  • 1.85e3
  • 2.11e3
91.99
  • 91.99
  • 90.85
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
2.44e3
  • 2.44e3
89.44
  • 89.44
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.67e3
  • 2.67e3
  • 2.75e3
88.43
  • 88.43
  • 88.09
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
2.80e3
  • 2.80e3
87.87
  • 87.87
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
3.93e3
  • 3.93e3
82.95
  • 82.95
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
4.09e3
  • 4.09e3
82.27
  • 82.27
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
6.21e3
  • 6.21e3
73.06
  • 73.06
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
51.49
  • 51.49
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
  • 1.38e4
  • 1.45e4
  • 1.52e4
44.21
  • 44.21
  • 40.05
  • 37.05
  • 33.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.36e4
  • 1.36e4
41.16
  • 41.16
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
39.59
  • 39.59
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
36.16
  • 36.16
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
34.87
  • 34.87
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
29.87
  • 29.87
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
1.68e4
  • 1.68e4
27.02
  • 27.02
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.87e4
  • 1.87e4
18.70
  • 18.70
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000022919 (SIX1)
HGNCHGNC:10887 (SIX1)
Uniprot/SPTREMBLF6W7Q8, F6W7Q8_HORSE

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