E. caballus Gene: S100A1 - ENSECAG00000022939 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000022939
NameS100A1
DescriptionS100 calcium binding protein A1 [Source:HGNC Symbol;Acc:HGNC:10486]
OrganismEquus caballus (horse)
Synonym(s)s100-alpha, s100a

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
34.4
  • 34.4
99.86
  • 99.86
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
68.0
  • 68.0
  • 99.2
99.71
  • 99.71
  • 99.57
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
143
  • 143
99.39
  • 99.39
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
188
  • 188
99.19
  • 99.19
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
256
  • 256
  • 311
98.89
  • 98.89
  • 98.66
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
270
  • 270
  • 370
98.84
  • 98.84
  • 98.40
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
365
  • 365
98.42
  • 98.42
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
371
  • 371
  • 588
  • 1.21e3
  • 1.34e3
98.40
  • 98.40
  • 97.45
  • 94.74
  • 94.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
374
  • 374
  • 395
98.38
  • 98.38
  • 98.29
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
433
  • 433
98.13
  • 98.13
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
558
  • 558
97.59
  • 97.59
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
940
  • 940
95.93
  • 95.93
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.02e3
  • 1.02e3
95.56
  • 95.56
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.03e3
  • 1.03e3
95.52
  • 95.52
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
2.71e3
  • 2.71e3
88.26
  • 88.26
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
3.37e3
  • 3.37e3
85.41
  • 85.41
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
3.61e3
  • 3.61e3
84.33
  • 84.33
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
6.54e3
  • 6.54e3
71.63
  • 71.63
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
6.66e3
  • 6.66e3
71.12
  • 71.12
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.12e4
  • 1.12e4
51.33
  • 51.33
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
  • 1.33e4
45.25
  • 45.25
  • 42.32
AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.42e4
  • 1.42e4
38.59
  • 38.59
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000022939 (S100A1)
HGNCHGNC:10486 (S100A1)
Uniprot/SPTREMBLF6UNB9, F6UNB9_HORSE

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