E. caballus Gene: HGD - ENSECAG00000023083 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000023083
NameHGD
Descriptionhomogentisate 1,2-dioxygenase [Source:HGNC Symbol;Acc:HGNC:4892]
OrganismEquus caballus (horse)
Synonym(s)aku, hgo

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0018241prime adult stage
396
  • 396
98.29
  • 98.29
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
552
  • 552
97.61
  • 97.61
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
3.44e3
  • 3.44e3
85.09
  • 85.09
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
55.30
  • 55.30
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
49.57
  • 49.57
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
  • 1.53e4
43.74
  • 43.74
  • 33.64
AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.36e4
  • 1.36e4
41.03
  • 41.03
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.45e4
  • 1.45e4
37.27
  • 37.27
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.48e4
  • 1.48e4
35.78
  • 35.78
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.50e4
  • 1.50e4
  • 1.58e4
34.92
  • 34.92
  • 31.66
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
34.02
  • 34.02
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
33.05
  • 33.05
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.65e4
  • 1.65e4
28.56
  • 28.56
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000023083 (HGD)
HGNCHGNC:4892 (HGD)
Uniprot/SPTREMBLF6U5B3, F6U5B3_HORSE

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