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E. caballus Gene: AFP - ENSECAG00000023229 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000023229
NameAFP
DescriptionEquus caballus alpha-fetoprotein (AFP), mRNA [Source:RefSeq mRNA;Acc:NM_001081952]
OrganismEquus caballus (horse)
Orthologs(s)17 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
7.97
  • 7.97
99.97
  • 99.97
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.87e3
  • 1.87e3
91.91
  • 91.91
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
8.59e3
  • 8.59e3
62.75
  • 62.75
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
36.44
  • 36.44
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
34.10
  • 34.10
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species17 genesCompare expression

Orthology information comes from OMA : ENSECAG00000023229.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Sarcopterygii1 geneCompare expression

Paralogy information comes from OMA : ENSECAG00000023229.

Cross-references

EnsemblENSECAG00000023229 (AFP)
Uniprot/SPTREMBLF6U4X2, F6U4X2_HORSE

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