E. caballus Gene: SSR3 - ENSECAG00000023239 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000023239
NameSSR3
Descriptionsignal sequence receptor, gamma (translocon-associated protein gamma) [Source:HGNC Symbol;Acc:HGNC:11325]
OrganismEquus caballus (horse)
Synonym(s)trapg

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
179
  • 179
99.23
  • 99.23
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
207
  • 207
99.11
  • 99.11
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
278
  • 278
  • 420
  • 794
  • 797
98.80
  • 98.80
  • 98.18
  • 96.56
  • 96.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
309
  • 309
98.66
  • 98.66
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
336
  • 336
  • 374
98.55
  • 98.55
  • 98.38
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
349
  • 349
98.49
  • 98.49
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
357
  • 357
98.46
  • 98.46
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
359
  • 359
98.45
  • 98.45
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
383
  • 383
98.34
  • 98.34
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
385
  • 385
  • 527
98.33
  • 98.33
  • 97.72
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
409
  • 409
98.23
  • 98.23
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
416
  • 416
98.20
  • 98.20
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
427
  • 427
98.15
  • 98.15
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
448
  • 448
  • 676
98.06
  • 98.06
  • 97.07
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
457
  • 457
98.02
  • 98.02
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
462
  • 462
  • 493
98.00
  • 98.00
  • 97.87
AEIR
  • AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
466
  • 466
97.98
  • 97.98
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
491
  • 491
97.88
  • 97.88
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
565
  • 565
97.56
  • 97.56
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
566
  • 566
97.55
  • 97.55
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
624
  • 624
  • 693
97.30
  • 97.30
  • 97.00
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
636
  • 636
97.25
  • 97.25
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000023239 (SSR3)
HGNCHGNC:11325 (SSR3)
Uniprot/SPTREMBLF6VAL9, F6VAL9_HORSE

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