E. caballus Gene: SKA1 - ENSECAG00000023484 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000023484
NameSKA1
Descriptionspindle and kinetochore associated complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28109]
OrganismEquus caballus (horse)
Synonym(s)c18orf24, mgc10200

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.01e3
  • 1.01e3
95.62
  • 95.62
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.43e3
  • 1.43e3
93.80
  • 93.80
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.19e3
  • 3.19e3
  • 4.90e3
  • 7.07e3
  • 9.31e3
86.16
  • 86.16
  • 78.75
  • 69.33
  • 59.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
6.37e3
  • 6.37e3
72.38
  • 72.38
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
8.45e3
  • 8.45e3
63.34
  • 63.34
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.67e3
  • 8.67e3
  • 1.40e4
62.42
  • 62.42
  • 39.19
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.47e3
  • 9.47e3
  • 1.12e4
58.94
  • 58.94
  • 51.32
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
55.38
  • 55.38
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
51.88
  • 51.88
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
51.40
  • 51.40
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
45.82
  • 45.82
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
44.54
  • 44.54
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.32e4
  • 1.32e4
42.89
  • 42.89
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
42.53
  • 42.53
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
  • 1.54e4
38.16
  • 38.16
  • 33.11
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
1.67e4
  • 1.67e4
27.75
  • 27.75
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.67e4
  • 1.67e4
27.75
  • 27.75
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.79e4
  • 1.79e4
22.22
  • 22.22
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000023484 (SKA1)
HGNCHGNC:28109 (SKA1)
Uniprot/SPTREMBLF6UK20, F6UK20_HORSE

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