E. caballus Gene: NKX2-5 - ENSECAG00000023495 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000023495
NameNKX2-5
DescriptionNK2 homeobox 5 [Source:HGNC Symbol;Acc:HGNC:2488]
OrganismEquus caballus (horse)
Synonym(s)csx, csx1, nkx2.5, nkx2e, nkx4-1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.25e4
  • 1.25e4
45.90
  • 45.90
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.33e4
  • 1.33e4
42.24
  • 42.24
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.65e4
  • 1.65e4
  • 2.27e4
28.27
  • 28.27
  • 1.47
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.98e4
  • 1.98e4
13.93
  • 13.93
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000023495 (NKX2-5)
HGNCHGNC:2488 (NKX2-5)
Uniprot/SPTREMBLF6UJ70, F6UJ70_HORSE

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