E. caballus Gene: SF3A1 - ENSECAG00000023962 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000023962
NameSF3A1
Descriptionsplicing factor 3a subunit 1 [Source:HGNC Symbol;Acc:HGNC:10765]
OrganismEquus caballus (horse)
Synonym(s)prp21, prpf21, sap114, sf3a120

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
843
  • 843
96.35
  • 96.35
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
957
  • 957
  • 1.62e3
  • 1.97e3
  • 2.81e3
95.85
  • 95.85
  • 93.00
  • 91.45
  • 87.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.08e3
  • 1.08e3
95.33
  • 95.33
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.19e3
  • 1.19e3
  • 1.35e3
94.85
  • 94.85
  • 94.14
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.43e3
  • 1.43e3
93.80
  • 93.80
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.57e3
  • 1.57e3
93.18
  • 93.18
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.72e3
  • 1.72e3
92.56
  • 92.56
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.89e3
  • 1.89e3
91.81
  • 91.81
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
2.04e3
  • 2.04e3
91.15
  • 91.15
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
2.28e3
  • 2.28e3
90.12
  • 90.12
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
2.39e3
  • 2.39e3
89.62
  • 89.62
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
2.44e3
  • 2.44e3
89.41
  • 89.41
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
2.52e3
  • 2.52e3
89.06
  • 89.06
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
2.75e3
  • 2.75e3
88.08
  • 88.08
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.85e3
  • 2.85e3
87.66
  • 87.66
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
2.94e3
  • 2.94e3
87.25
  • 87.25
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
2.95e3
  • 2.95e3
87.23
  • 87.23
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
3.25e3
  • 3.25e3
85.90
  • 85.90
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.92e3
  • 3.92e3
  • 4.18e3
82.98
  • 82.98
  • 81.89
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
4.13e3
  • 4.13e3
  • 4.36e3
82.11
  • 82.11
  • 81.08
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.58e3
  • 5.58e3
  • 6.32e3
75.81
  • 75.81
  • 72.61
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
6.66e3
  • 6.66e3
  • 7.01e3
71.11
  • 71.11
  • 69.61
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
6.70e3
  • 6.70e3
70.94
  • 70.94
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000023962 (SF3A1)
HGNCHGNC:10765 (SF3A1)
Uniprot/SPTREMBLF6Y642, F6Y642_HORSE

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