E. caballus Gene: SCNM1 - ENSECAG00000023965 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000023965
NameSCNM1
Descriptionsodium channel modifier 1 [Source:HGNC Symbol;Acc:HGNC:23136]
OrganismEquus caballus (horse)
Synonym(s)mgc3180

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.64e3
  • 1.64e3
92.88
  • 92.88
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.76e3
  • 1.76e3
  • 2.09e3
92.36
  • 92.36
  • 90.93
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.91e3
  • 1.91e3
  • 2.45e3
  • 2.59e3
  • 3.30e3
91.72
  • 91.72
  • 89.37
  • 88.77
  • 85.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.32e3
  • 2.32e3
  • 2.69e3
89.93
  • 89.93
  • 88.34
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.45e3
  • 2.45e3
  • 3.38e3
89.39
  • 89.39
  • 85.34
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
2.60e3
  • 2.60e3
88.72
  • 88.72
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.85e3
  • 2.85e3
  • 3.06e3
87.63
  • 87.63
  • 86.74
AEIR
  • AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
2.93e3
  • 2.93e3
87.30
  • 87.30
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
3.03e3
  • 3.03e3
86.85
  • 86.85
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
3.39e3
  • 3.39e3
85.31
  • 85.31
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
3.98e3
  • 3.98e3
82.74
  • 82.74
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
4.07e3
  • 4.07e3
82.36
  • 82.36
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
4.08e3
  • 4.08e3
82.29
  • 82.29
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
4.19e3
  • 4.19e3
81.84
  • 81.84
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
4.41e3
  • 4.41e3
80.86
  • 80.86
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
4.48e3
  • 4.48e3
80.56
  • 80.56
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
4.58e3
  • 4.58e3
80.15
  • 80.15
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.22e3
  • 5.22e3
  • 6.45e3
77.39
  • 77.39
  • 72.03
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
5.23e3
  • 5.23e3
77.31
  • 77.31
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
5.61e3
  • 5.61e3
75.69
  • 75.69
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
5.79e3
  • 5.79e3
74.88
  • 74.88
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
8.82e3
  • 8.82e3
61.73
  • 61.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000023965 (SCNM1)
HGNCHGNC:23136 (SCNM1)
Uniprot/SPTREMBLF6WMF6, F6WMF6_HORSE

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