E. caballus Gene: PYGM - ENSECAG00000024000 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000024000
NamePYGM
DescriptionEquus caballus phosphorylase, glycogen, muscle (PYGM), mRNA [Source:RefSeq mRNA;Acc:NM_001145253]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
54.0
  • 54.0
  • 59.4
99.77
  • 99.77
  • 99.75
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
68.6
  • 68.6
99.71
  • 99.71
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
71.6
  • 71.6
  • 106
99.69
  • 99.69
  • 99.55
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.43e3
  • 3.43e3
  • 4.38e3
85.15
  • 85.15
  • 81.02
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
6.42e3
  • 6.42e3
72.15
  • 72.15
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
9.21e3
  • 9.21e3
60.08
  • 60.08
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
9.23e3
  • 9.23e3
59.99
  • 59.99
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.25e3
  • 9.25e3
  • 1.07e4
59.88
  • 59.88
  • 53.61
AEIR
  • AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
9.90e3
  • 9.90e3
57.05
  • 57.05
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.07e4
  • 1.07e4
  • 1.08e4
  • 1.40e4
  • 1.46e4
53.81
  • 53.81
  • 53.08
  • 39.37
  • 36.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
  • 1.20e4
52.26
  • 52.26
  • 48.04
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
50.07
  • 50.07
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
49.00
  • 49.00
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
44.31
  • 44.31
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.34e4
  • 1.34e4
42.08
  • 42.08
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
39.88
  • 39.88
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
39.45
  • 39.45
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
36.59
  • 36.59
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
35.19
  • 35.19
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
34.88
  • 34.88
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
31.83
  • 31.83
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAB480071
EnsemblENSECAG00000024000 (PYGM)
Uniprot/SPTREMBLB9A9U9, B9A9U9_HORSE

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