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E. caballus Gene: SOX10 - ENSECAG00000024147 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000024147
NameSOX10
DescriptionSRY-box 10 [Source:HGNC Symbol;Acc:HGNC:11190]
OrganismEquus caballus (horse)
Synonym(s)dom, ws2e, ws4
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.39e3
  • 1.39e3
93.96
  • 93.96
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.01e3
  • 2.01e3
91.31
  • 91.31
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.04e3
  • 2.04e3
  • 2.13e3
91.15
  • 91.15
  • 90.77
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
6.17e3
  • 6.17e3
  • 7.66e3
73.26
  • 73.26
  • 66.81
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
8.13e3
  • 8.13e3
64.75
  • 64.75
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
8.92e3
  • 8.92e3
61.33
  • 61.33
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.10e4
  • 1.10e4
  • 1.17e4
  • 1.28e4
  • 1.57e4
52.44
  • 52.44
  • 49.10
  • 44.65
  • 31.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
50.05
  • 50.05
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
43.36
  • 43.36
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.32e4
  • 1.32e4
42.60
  • 42.60
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
42.06
  • 42.06
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
41.05
  • 41.05
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.40e4
  • 1.40e4
39.30
  • 39.30
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
39.08
  • 39.08
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
38.48
  • 38.48
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
32.61
  • 32.61
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
31.99
  • 31.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSECAG00000024147.

Cross-references

EnsemblENSECAG00000024147 (SOX10)
HGNCHGNC:11190 (SOX10)
Uniprot/SPTREMBLF6WZU9, F6WZU9_HORSE

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