E. caballus Gene: FAM180A - ENSECAG00000024192 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000024192
NameFAM180A
Descriptionfamily with sequence similarity 180 member A [Source:HGNC Symbol;Acc:HGNC:33773]
OrganismEquus caballus (horse)
Synonym(s)hwkm1940, unq1940

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.82e3
  • 1.82e3
92.11
  • 92.11
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
3.25e3
  • 3.25e3
85.90
  • 85.90
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
5.41e3
  • 5.41e3
76.55
  • 76.55
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
5.71e3
  • 5.71e3
75.24
  • 75.24
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.89e3
  • 5.89e3
  • 9.40e3
74.46
  • 74.46
  • 59.24
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
6.99e3
  • 6.99e3
69.71
  • 69.71
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
8.16e3
  • 8.16e3
64.60
  • 64.60
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
9.20e3
  • 9.20e3
60.10
  • 60.10
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.25e3
  • 9.25e3
  • 1.14e4
59.87
  • 59.87
  • 50.72
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
9.68e3
  • 9.68e3
58.03
  • 58.03
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.34e4
  • 1.34e4
41.85
  • 41.85
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
38.39
  • 38.39
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
32.49
  • 32.49
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.58e4
  • 1.58e4
31.39
  • 31.39
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
  • 2.27e4
29.60
  • 29.60
  • 1.47
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
1.71e4
  • 1.71e4
25.74
  • 25.74
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000024192 (FAM180A)
HGNCHGNC:33773 (FAM180A)
Uniprot/SPTREMBLF6X495, F6X495_HORSE

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