E. caballus Gene: LRRC49 - ENSECAG00000024328 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000024328
NameLRRC49
Descriptionleucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
OrganismEquus caballus (horse)
Synonym(s)flj20156

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
2.91e3
  • 2.91e3
87.39
  • 87.39
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.30e3
  • 3.30e3
  • 3.76e3
85.69
  • 85.69
  • 83.71
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
4.09e3
  • 4.09e3
  • 5.16e3
  • 7.74e3
  • 9.79e3
82.26
  • 82.26
  • 77.65
  • 66.42
  • 57.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
4.32e3
  • 4.32e3
  • 5.28e3
81.28
  • 81.28
  • 77.10
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
6.16e3
  • 6.16e3
73.31
  • 73.31
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
6.17e3
  • 6.17e3
73.25
  • 73.25
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
7.08e3
  • 7.08e3
69.31
  • 69.31
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
8.04e3
  • 8.04e3
65.12
  • 65.12
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
8.41e3
  • 8.41e3
63.53
  • 63.53
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
52.76
  • 52.76
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
51.84
  • 51.84
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
51.77
  • 51.77
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
49.78
  • 49.78
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
45.61
  • 45.61
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
44.86
  • 44.86
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
41.46
  • 41.46
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.36e4
  • 1.36e4
  • 1.46e4
41.18
  • 41.18
  • 36.58
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
38.71
  • 38.71
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.52e4
  • 1.52e4
34.01
  • 34.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000024328 (LRRC49)
HGNCHGNC:25965 (LRRC49)
Uniprot/SPTREMBLF6XFE5, F6XFE5_HORSE

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