E. caballus Gene: LHX6 - ENSECAG00000024502 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000024502
NameLHX6
DescriptionLIM homeobox 6 [Source:HGNC Symbol;Acc:HGNC:21735]
OrganismEquus caballus (horse)
Synonym(s)lhx6.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
7.04e3
  • 7.04e3
69.46
  • 69.46
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
56.10
  • 56.10
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
  • 1.16e4
53.62
  • 53.62
  • 49.84
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.14e4
  • 1.14e4
  • 1.20e4
50.71
  • 50.71
  • 48.15
AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
50.26
  • 50.26
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.21e4
  • 1.21e4
47.71
  • 47.71
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
44.50
  • 44.50
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
44.01
  • 44.01
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
43.21
  • 43.21
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.32e4
  • 1.32e4
42.74
  • 42.74
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
42.38
  • 42.38
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
  • 1.47e4
  • 1.47e4
  • 1.70e4
37.35
  • 37.35
  • 36.26
  • 36.04
  • 26.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.69e4
  • 1.69e4
26.59
  • 26.59
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.70e4
  • 1.70e4
26.29
  • 26.29
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
1.77e4
  • 1.77e4
23.30
  • 23.30
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000024502 (LHX6)
HGNCHGNC:21735 (LHX6)
Uniprot/SPTREMBLF6YQ13, F6YQ13_HORSE

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