E. caballus Gene: LGI1 - ENSECAG00000024597 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000024597
NameLGI1
Descriptionleucine-rich, glioma inactivated 1 [Source:HGNC Symbol;Acc:HGNC:6572]
OrganismEquus caballus (horse)
Synonym(s)epitempin, ept, etl1, ib1099

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
2.79e3
  • 2.79e3
87.91
  • 87.91
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.76e3
  • 3.76e3
  • 5.44e3
83.70
  • 83.70
  • 76.40
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.80e3
  • 3.80e3
83.53
  • 83.53
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
4.06e3
  • 4.06e3
  • 4.28e3
82.39
  • 82.39
  • 81.45
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.31e4
  • 1.31e4
43.17
  • 43.17
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
40.71
  • 40.71
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.49e4
  • 1.49e4
  • 1.60e4
35.25
  • 35.25
  • 30.64
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
34.02
  • 34.02
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
  • 1.76e4
31.31
  • 31.31
  • 23.64
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
29.75
  • 29.75
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.78e4
  • 1.78e4
22.74
  • 22.74
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000024597 (LGI1)
HGNCHGNC:6572 (LGI1)
Uniprot/SPTREMBLF6QPB4, F6QPB4_HORSE

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