E. caballus Gene: SPATA9 - ENSECAG00000024733 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000024733
NameSPATA9
Descriptionspermatogenesis associated 9 [Source:HGNC Symbol;Acc:HGNC:22988]
OrganismEquus caballus (horse)
Synonym(s)flj35906, nyd-sp16
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.57e3
  • 1.57e3
  • 2.07e3
  • 2.25e3
  • 1.18e4
93.20
  • 93.20
  • 91.03
  • 90.23
  • 48.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.33e3
  • 9.33e3
  • 9.71e3
59.57
  • 59.57
  • 57.89
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.89e3
  • 9.89e3
  • 1.01e4
57.10
  • 57.10
  • 56.24
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
51.39
  • 51.39
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
49.47
  • 49.47
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.21e4
  • 1.21e4
47.70
  • 47.70
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
47.18
  • 47.18
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
  • 1.29e4
45.37
  • 45.37
  • 44.27
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
36.80
  • 36.80
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
36.65
  • 36.65
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
36.15
  • 36.15
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
34.92
  • 34.92
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.53e4
  • 1.53e4
33.74
  • 33.74
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
31.89
  • 31.89
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.73e4
  • 1.73e4
24.80
  • 24.80
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.76e4
  • 1.76e4
23.84
  • 23.84
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.86e4
  • 1.86e4
19.47
  • 19.47
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota15 species15 genesCompare expression

Orthology information comes from OMA : ENSECAG00000024733.

Cross-references

EnsemblENSECAG00000024733 (SPATA9)
HGNCHGNC:22988 (SPATA9)
Uniprot/SPTREMBLF6SJJ3, F6SJJ3_HORSE

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