E. caballus Gene: CCDC172 - ENSECAG00000024829 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000024829
NameCCDC172
Descriptioncoiled-coil domain containing 172 [Source:HGNC Symbol;Acc:HGNC:30524]
OrganismEquus caballus (horse)
Synonym(s)c10orf96, mgc35062

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
5.08e3
  • 5.08e3
  • 5.29e3
  • 7.31e3
  • 1.20e4
77.98
  • 77.98
  • 77.08
  • 68.31
  • 47.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
51.57
  • 51.57
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.12e4
  • 1.12e4
51.41
  • 51.41
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
50.74
  • 50.74
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
49.39
  • 49.39
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
46.17
  • 46.17
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
44.98
  • 44.98
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.27e4
  • 1.27e4
44.95
  • 44.95
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
44.06
  • 44.06
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
43.67
  • 43.67
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
  • 1.78e4
43.34
  • 43.34
  • 22.82
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
42.24
  • 42.24
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
42.07
  • 42.07
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
  • 1.49e4
38.84
  • 38.84
  • 35.22
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
1.43e4
  • 1.43e4
38.13
  • 38.13
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.46e4
  • 1.46e4
36.89
  • 36.89
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
32.30
  • 32.30
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.56e4
  • 1.56e4
32.17
  • 32.17
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.59e4
  • 1.59e4
30.86
  • 30.86
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.76e4
  • 1.76e4
23.47
  • 23.47
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
1.82e4
  • 1.82e4
20.86
  • 20.86
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.88e4
  • 1.88e4
18.55
  • 18.55
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000024829 (CCDC172)
HGNCHGNC:30524 (CCDC172)
Uniprot/SPTREMBLF6R499, F6R499_HORSE

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