E. caballus Gene: TRPC4 - ENSECAG00000024910 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000024910
NameTRPC4
Descriptiontransient receptor potential cation channel, subfamily C, member 4 [Source:HGNC Symbol;Acc:HGNC:12336]
OrganismEquus caballus (horse)
Synonym(s)htrp4, trp4

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.26e4
  • 1.26e4
45.45
  • 45.45
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
44.73
  • 44.73
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
  • 1.34e4
43.34
  • 43.34
  • 41.72
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.33e4
  • 1.33e4
42.37
  • 42.37
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
42.30
  • 42.30
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
42.07
  • 42.07
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
  • 1.40e4
41.23
  • 41.23
  • 39.22
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.38e4
  • 1.38e4
  • 1.51e4
40.33
  • 40.33
  • 34.55
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
38.14
  • 38.14
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.48e4
  • 1.48e4
35.82
  • 35.82
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
1.53e4
  • 1.53e4
33.63
  • 33.63
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
29.92
  • 29.92
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.64e4
  • 1.64e4
28.96
  • 28.96
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.79e4
  • 1.79e4
  • 1.87e4
22.50
  • 22.50
  • 18.78
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000024910 (TRPC4)
HGNCHGNC:12336 (TRPC4)
Uniprot/SPTREMBLF6PIF5, F6PIF5_HORSE

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