E. caballus Gene: ITGA5 - ENSECAG00000024979 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000024979
NameITGA5
Descriptionintegrin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6141]
OrganismEquus caballus (horse)
Synonym(s)cd49e, fnra

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
762
  • 762
96.70
  • 96.70
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
988
  • 988
95.72
  • 95.72
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
3.36e3
  • 3.36e3
85.45
  • 85.45
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.87e3
  • 3.87e3
  • 4.31e3
83.21
  • 83.21
  • 81.31
AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
5.78e3
  • 5.78e3
74.95
  • 74.95
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
6.33e3
  • 6.33e3
72.54
  • 72.54
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
6.42e3
  • 6.42e3
72.17
  • 72.17
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
6.61e3
  • 6.61e3
71.32
  • 71.32
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
6.71e3
  • 6.71e3
70.92
  • 70.92
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
7.06e3
  • 7.06e3
69.40
  • 69.40
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
7.18e3
  • 7.18e3
68.85
  • 68.85
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.52e3
  • 8.52e3
  • 8.58e3
63.07
  • 63.07
  • 62.80
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.88e3
  • 8.88e3
61.49
  • 61.49
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.96e3
  • 8.96e3
  • 9.90e3
61.14
  • 61.14
  • 57.05
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
9.32e3
  • 9.32e3
59.60
  • 59.60
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
55.31
  • 55.31
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
53.67
  • 53.67
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.07e4
  • 1.07e4
  • 1.09e4
  • 1.17e4
  • 1.25e4
53.42
  • 53.42
  • 52.87
  • 49.19
  • 45.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
44.84
  • 44.84
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.30e4
  • 1.30e4
  • 1.30e4
43.83
  • 43.83
  • 43.48
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.38e4
  • 1.38e4
  • 1.51e4
40.28
  • 40.28
  • 34.42
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.47e4
  • 1.47e4
36.43
  • 36.43
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.50e4
  • 1.50e4
35.02
  • 35.02
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000024979 (ITGA5)
HGNCHGNC:6141 (ITGA5)
Uniprot/SPTREMBLF6QLX7, F6QLX7_HORSE, F6QLZ6, F6QLZ6_HORSE

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