E. caballus Gene: HIST1H1C - ENSECAG00000024980 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000024980
NameHIST1H1C
Descriptionhistone cluster 1, H1c [Source:HGNC Symbol;Acc:HGNC:4716]
OrganismEquus caballus (horse)
Synonym(s)h1.2, h1c, h1f2, h1s-1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
206
  • 206
  • 4.92e3
99.11
  • 99.11
  • 78.65
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
273
  • 273
98.82
  • 98.82
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
560
  • 560
  • 687
97.58
  • 97.58
  • 97.02
AEIR
  • AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
790
  • 790
96.58
  • 96.58
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.06e3
  • 1.06e3
95.40
  • 95.40
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.33e3
  • 1.33e3
94.25
  • 94.25
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.78e3
  • 1.78e3
92.28
  • 92.28
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.03e3
  • 2.03e3
  • 3.17e3
91.18
  • 91.18
  • 86.27
AEIR
  • AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
2.24e3
  • 2.24e3
90.28
  • 90.28
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
2.83e3
  • 2.83e3
87.73
  • 87.73
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
3.11e3
  • 3.11e3
86.52
  • 86.52
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
4.26e3
  • 4.26e3
81.51
  • 81.51
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
4.49e3
  • 4.49e3
  • 6.58e3
80.52
  • 80.52
  • 71.45
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
6.55e3
  • 6.55e3
  • 7.35e3
71.58
  • 71.58
  • 68.14
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
6.84e3
  • 6.84e3
70.35
  • 70.35
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
6.94e3
  • 6.94e3
69.90
  • 69.90
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
7.91e3
  • 7.91e3
65.69
  • 65.69
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
8.51e3
  • 8.51e3
63.08
  • 63.08
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
9.30e3
  • 9.30e3
59.69
  • 59.69
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
9.68e3
  • 9.68e3
58.04
  • 58.04
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
  • 1.31e4
  • 1.38e4
  • 1.45e4
44.81
  • 44.81
  • 43.00
  • 40.17
  • 37.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
35.16
  • 35.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000024980 (HIST1H1C)
HGNCHGNC:4716 (HIST1H1C)
Uniprot/SPTREMBLF6S2F8, F6S2F8_HORSE

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