E. caballus Gene: NUP54 - ENSECAG00000025004 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000025004
NameNUP54
Descriptionnucleoporin 54kDa [Source:HGNC Symbol;Acc:HGNC:17359]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
2.59e3
  • 2.59e3
88.77
  • 88.77
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
2.70e3
  • 2.70e3
88.32
  • 88.32
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
3.06e3
  • 3.06e3
  • 5.34e3
  • 7.34e3
  • 1.02e4
86.75
  • 86.75
  • 76.84
  • 68.18
  • 55.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
3.07e3
  • 3.07e3
86.70
  • 86.70
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.41e3
  • 3.41e3
  • 3.46e3
85.24
  • 85.24
  • 85.01
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
3.50e3
  • 3.50e3
84.85
  • 84.85
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.66e3
  • 3.66e3
  • 3.69e3
84.14
  • 84.14
  • 84.00
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
3.81e3
  • 3.81e3
83.48
  • 83.48
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
3.85e3
  • 3.85e3
83.31
  • 83.31
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.88e3
  • 3.88e3
  • 4.05e3
83.19
  • 83.19
  • 82.46
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
4.31e3
  • 4.31e3
81.33
  • 81.33
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
4.36e3
  • 4.36e3
81.08
  • 81.08
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
4.60e3
  • 4.60e3
80.03
  • 80.03
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.06e3
  • 5.06e3
  • 5.84e3
78.05
  • 78.05
  • 74.67
AEIR
  • AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
5.44e3
  • 5.44e3
76.39
  • 76.39
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
5.85e3
  • 5.85e3
74.64
  • 74.64
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
6.06e3
  • 6.06e3
73.73
  • 73.73
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
6.08e3
  • 6.08e3
73.63
  • 73.63
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
6.48e3
  • 6.48e3
  • 6.58e3
71.91
  • 71.91
  • 71.45
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.29e3
  • 7.29e3
68.40
  • 68.40
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
7.47e3
  • 7.47e3
67.61
  • 67.61
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
7.55e3
  • 7.55e3
67.27
  • 67.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000025004 (NUP54)
HGNCHGNC:17359 (NUP54)
Uniprot/SPTREMBLF6RKT8, F6RKT8_HORSE

Do not show this banner again