E. caballus Gene: TNRC6A - ENSECAG00000025056 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000025056
NameTNRC6A
Descriptiontrinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
OrganismEquus caballus (horse)
Synonym(s)cagh26, gw182, kiaa1460, tnrc6

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001371gluteus medius
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
2.07e3
  • 2.07e3
  • 3.90e3
91.03
  • 91.03
  • 83.10
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
3.50e3
  • 3.50e3
84.81
  • 84.81
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
3.53e3
  • 3.53e3
84.68
  • 84.68
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
3.63e3
  • 3.63e3
84.26
  • 84.26
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
3.71e3
  • 3.71e3
83.90
  • 83.90
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
3.80e3
  • 3.80e3
83.54
  • 83.54
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
4.00e3
  • 4.00e3
82.64
  • 82.64
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
4.35e3
  • 4.35e3
81.13
  • 81.13
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
5.07e3
  • 5.07e3
78.00
  • 78.00
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.10e3
  • 5.10e3
  • 5.18e3
77.90
  • 77.90
  • 77.56
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.13e3
  • 5.13e3
  • 7.64e3
  • 8.85e3
  • 1.04e4
77.74
  • 77.74
  • 66.86
  • 61.64
  • 55.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
5.75e3
  • 5.75e3
75.08
  • 75.08
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.93e3
  • 5.93e3
  • 8.06e3
74.30
  • 74.30
  • 65.04
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
6.39e3
  • 6.39e3
72.28
  • 72.28
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.27e3
  • 7.27e3
  • 7.42e3
68.49
  • 68.49
  • 67.83
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
7.28e3
  • 7.28e3
  • 7.40e3
68.42
  • 68.42
  • 67.92
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
7.37e3
  • 7.37e3
68.06
  • 68.06
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.57e3
  • 7.57e3
67.17
  • 67.17
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
7.84e3
  • 7.84e3
66.02
  • 66.02
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.69e3
  • 8.69e3
62.32
  • 62.32
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
9.51e3
  • 9.51e3
58.76
  • 58.76
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
9.56e3
  • 9.56e3
58.54
  • 58.54
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
9.87e3
  • 9.87e3
57.21
  • 57.21
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000025056 (TNRC6A)
HGNCHGNC:11969 (TNRC6A)
Uniprot/SPTREMBLF6QKH3, F6QKH3_HORSE

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