E. caballus Gene: HMGCL - ENSECAG00000025131 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000025131
NameHMGCL
Description3-hydroxymethyl-3-methylglutaryl-CoA lyase [Source:HGNC Symbol;Acc:HGNC:5005]
OrganismEquus caballus (horse)
Synonym(s)hl

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.52e3
  • 1.52e3
93.41
  • 93.41
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.63e3
  • 1.63e3
92.93
  • 92.93
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.63e3
  • 1.63e3
  • 2.02e3
92.93
  • 92.93
  • 91.25
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
2.53e3
  • 2.53e3
89.03
  • 89.03
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.83e3
  • 2.83e3
  • 3.39e3
87.75
  • 87.75
  • 85.29
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
2.88e3
  • 2.88e3
87.50
  • 87.50
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
2.89e3
  • 2.89e3
87.48
  • 87.48
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.12e3
  • 3.12e3
86.47
  • 86.47
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
3.14e3
  • 3.14e3
86.36
  • 86.36
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
3.30e3
  • 3.30e3
85.69
  • 85.69
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
3.63e3
  • 3.63e3
84.24
  • 84.24
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
3.66e3
  • 3.66e3
84.14
  • 84.14
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.73e3
  • 3.73e3
  • 4.00e3
  • 5.48e3
  • 7.20e3
83.85
  • 83.85
  • 82.64
  • 76.22
  • 68.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
3.94e3
  • 3.94e3
82.93
  • 82.93
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.98e3
  • 3.98e3
  • 4.00e3
82.74
  • 82.74
  • 82.66
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
4.34e3
  • 4.34e3
  • 4.87e3
81.16
  • 81.16
  • 78.90
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.57e3
  • 4.57e3
  • 5.14e3
80.19
  • 80.19
  • 77.71
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
4.83e3
  • 4.83e3
79.06
  • 79.06
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
6.39e3
  • 6.39e3
72.30
  • 72.30
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
6.39e3
  • 6.39e3
72.28
  • 72.28
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
8.51e3
  • 8.51e3
63.08
  • 63.08
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
8.70e3
  • 8.70e3
62.27
  • 62.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000025131 (HMGCL)
HGNCHGNC:5005 (HMGCL)
Uniprot/SPTREMBLF6Q4C8, F6Q4C8_HORSE

Do not show this banner again