E. caballus Gene: U5 - ENSECAG00000025493 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000025493
NameU5
DescriptionU5 spliceosomal RNA [Source:RFAM;Acc:RF00020]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
341
  • 341
98.53
  • 98.53
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
518
  • 518
  • 605
97.76
  • 97.76
  • 97.38
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
4.06e3
  • 4.06e3
  • 9.03e3
82.38
  • 82.38
  • 60.83
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.84e3
  • 6.84e3
  • 1.30e4
70.32
  • 70.32
  • 43.79
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
6.85e3
  • 6.85e3
  • 1.06e4
  • 1.88e4
70.29
  • 70.29
  • 53.93
  • 18.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
8.34e3
  • 8.34e3
63.83
  • 63.83
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
8.39e3
  • 8.39e3
63.59
  • 63.59
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
40.58
  • 40.58
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
37.14
  • 37.14
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
34.19
  • 34.19
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
29.73
  • 29.73
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.68e4
  • 1.68e4
27.00
  • 27.00
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.77e4
  • 1.77e4
23.37
  • 23.37
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.84e4
  • 1.84e4
20.15
  • 20.15
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000025493 (U5)

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