E. caballus Gene: U2 - ENSECAG00000025571 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000025571
NameU2
DescriptionU2 spliceosomal RNA [Source:RFAM;Acc:RF00004]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
14.5
  • 14.5
  • 7.36e3
99.94
  • 99.94
  • 68.10
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
16.3
  • 16.3
  • 19.5
99.93
  • 99.93
  • 99.92
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
40.2
  • 40.2
99.83
  • 99.83
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
72.0
  • 72.0
99.69
  • 99.69
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
7.29e3
  • 7.29e3
  • 7.59e3
  • 1.20e4
68.37
  • 68.37
  • 67.09
  • 48.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
8.17e3
  • 8.17e3
64.58
  • 64.58
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
8.90e3
  • 8.90e3
61.39
  • 61.39
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
9.89e3
  • 9.89e3
57.12
  • 57.12
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
  • 1.37e4
55.91
  • 55.91
  • 40.38
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
54.56
  • 54.56
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
53.12
  • 53.12
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.15e4
  • 1.15e4
50.07
  • 50.07
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
49.19
  • 49.19
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
46.83
  • 46.83
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.27e4
  • 1.27e4
  • 1.81e4
45.08
  • 45.08
  • 21.56
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
41.68
  • 41.68
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
34.24
  • 34.24
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.62e4
  • 1.62e4
  • 1.82e4
29.77
  • 29.77
  • 21.24
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.65e4
  • 1.65e4
28.65
  • 28.65
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.72e4
  • 1.72e4
25.26
  • 25.26
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.74e4
  • 1.74e4
24.66
  • 24.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000025571 (U2)

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