E. caballus Gene: SNORD116 - ENSECAG00000025589 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000025589
NameSNORD116
DescriptionSmall nucleolar RNA SNORD116 [Source:RFAM;Acc:RF00108]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.19e3
  • 1.19e3
  • 8.38e3
94.85
  • 94.85
  • 63.66
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
3.09e3
  • 3.09e3
86.61
  • 86.61
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.30e3
  • 5.30e3
  • 7.60e3
77.01
  • 77.01
  • 67.02
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
7.32e3
  • 7.32e3
68.24
  • 68.24
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
8.46e3
  • 8.46e3
63.32
  • 63.32
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.54e3
  • 9.54e3
58.62
  • 58.62
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
49.93
  • 49.93
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
  • 1.41e4
45.61
  • 45.61
  • 38.65
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.40e4
  • 1.40e4
  • 1.52e4
39.46
  • 39.46
  • 33.94
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
30.14
  • 30.14
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.69e4
  • 1.69e4
26.91
  • 26.91
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.82e4
  • 1.82e4
21.14
  • 21.14
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000025589 (SNORD116)

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