E. caballus Gene: U6 - ENSECAG00000025609 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000025609
NameU6
DescriptionU6 spliceosomal RNA [Source:RFAM;Acc:RF00026]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.74e3
  • 2.74e3
  • 1.24e4
88.12
  • 88.12
  • 46.23
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
4.59e3
  • 4.59e3
80.11
  • 80.11
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
4.78e3
  • 4.78e3
79.25
  • 79.25
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.24e4
  • 1.24e4
  • 1.83e4
46.37
  • 46.37
  • 20.84
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
  • 1.95e4
  • 1.95e4
45.78
  • 45.78
  • 15.52
  • 15.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.67e4
  • 1.67e4
27.39
  • 27.39
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.88e4
  • 1.88e4
18.57
  • 18.57
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.90e4
  • 1.90e4
17.75
  • 17.75
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.94e4
  • 1.94e4
16.04
  • 16.04
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
2.04e4
  • 2.04e4
11.69
  • 11.69
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000025609 (U6)

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