E. caballus Gene: U6 - ENSECAG00000025613 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000025613
NameU6
DescriptionU6 spliceosomal RNA [Source:RFAM;Acc:RF00026]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.56e3
  • 5.56e3
  • 1.40e4
75.91
  • 75.91
  • 39.21
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
8.30e3
  • 8.30e3
64.02
  • 64.02
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
47.56
  • 47.56
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.32e4
  • 1.32e4
  • 1.43e4
42.96
  • 42.96
  • 37.92
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.36e4
  • 1.36e4
41.09
  • 41.09
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
34.88
  • 34.88
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.63e4
  • 1.63e4
29.42
  • 29.42
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.88e4
  • 1.88e4
18.52
  • 18.52
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.94e4
  • 1.94e4
16.06
  • 16.06
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
2.10e4
  • 2.10e4
9.07
  • 9.07
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000025613 (U6)

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