E. caballus Gene: SNORA42 - ENSECAG00000025618 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000025618
NameSNORA42
DescriptionSmall nucleolar RNA SNORA42/SNORA80 family [Source:RFAM;Acc:RF00406]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
595
  • 595
97.43
  • 97.43
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.10e3
  • 3.10e3
  • 6.42e3
86.56
  • 86.56
  • 72.14
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
3.71e3
  • 3.71e3
83.91
  • 83.91
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
4.35e3
  • 4.35e3
81.15
  • 81.15
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
4.39e3
  • 4.39e3
80.98
  • 80.98
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
4.67e3
  • 4.67e3
79.73
  • 79.73
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.37e3
  • 5.37e3
  • 7.45e3
  • 8.96e3
76.73
  • 76.73
  • 67.70
  • 61.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
5.49e3
  • 5.49e3
76.18
  • 76.18
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
6.60e3
  • 6.60e3
71.36
  • 71.36
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
8.30e3
  • 8.30e3
64.00
  • 64.00
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
8.64e3
  • 8.64e3
62.51
  • 62.51
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.81e3
  • 8.81e3
  • 1.23e4
61.79
  • 61.79
  • 46.48
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
55.75
  • 55.75
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
49.64
  • 49.64
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.66e4
  • 1.66e4
27.91
  • 27.91
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000025618 (SNORA42)

Do not show this banner again