E. caballus Gene: SNORD16 - ENSECAG00000025690 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000025690
NameSNORD16
DescriptionSmall nucleolar RNA SNORD16 [Source:RFAM;Acc:RF00138]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
3.22e3
  • 3.22e3
86.05
  • 86.05
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
7.34e3
  • 7.34e3
68.15
  • 68.15
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.47e3
  • 7.47e3
  • 9.67e3
  • 1.05e4
67.60
  • 67.60
  • 58.06
  • 54.39
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
8.59e3
  • 8.59e3
  • 9.49e3
62.73
  • 62.73
  • 58.84
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.98e3
  • 8.98e3
61.06
  • 61.06
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
56.26
  • 56.26
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.02e4
  • 1.02e4
55.90
  • 55.90
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
53.83
  • 53.83
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.09e4
  • 1.09e4
52.76
  • 52.76
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
47.96
  • 47.96
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
47.46
  • 47.46
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
  • 1.63e4
40.53
  • 40.53
  • 29.12
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
35.58
  • 35.58
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
35.16
  • 35.16
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.69e4
  • 1.69e4
26.72
  • 26.72
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000025690 (SNORD16)

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