E. caballus Gene: U3 - ENSECAG00000025867 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000025867
NameU3
DescriptionSmall nucleolar RNA U3 [Source:RFAM;Acc:RF00012]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
4.00
  • 4.00
  • 3.65e3
99.99
  • 99.99
  • 84.16
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.22
  • 9.22
  • 12.0
99.96
  • 99.96
  • 99.95
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
24.0
  • 24.0
99.90
  • 99.90
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
52.9
  • 52.9
99.77
  • 99.77
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
181
  • 181
99.22
  • 99.22
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.18e3
  • 1.18e3
94.88
  • 94.88
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
2.18e3
  • 2.18e3
  • 3.07e3
  • 4.24e3
  • 9.85e3
90.56
  • 90.56
  • 86.67
  • 81.62
  • 57.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
3.31e3
  • 3.31e3
85.66
  • 85.66
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
3.85e3
  • 3.85e3
83.30
  • 83.30
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
3.99e3
  • 3.99e3
82.70
  • 82.70
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
4.58e3
  • 4.58e3
80.15
  • 80.15
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
4.90e3
  • 4.90e3
78.77
  • 78.77
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
5.36e3
  • 5.36e3
76.76
  • 76.76
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.97e3
  • 5.97e3
  • 6.53e3
74.11
  • 74.11
  • 71.70
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.18e3
  • 8.18e3
  • 8.97e3
64.53
  • 64.53
  • 61.10
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
55.91
  • 55.91
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
52.98
  • 52.98
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.15e4
  • 1.15e4
50.26
  • 50.26
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.37e4
  • 1.37e4
40.49
  • 40.49
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.67e4
  • 1.67e4
27.64
  • 27.64
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
2.05e4
  • 2.05e4
10.96
  • 10.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000025867 (U3)

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