E. caballus Gene: snoR38 - ENSECAG00000025962 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000025962
NamesnoR38
DescriptionSmall nucleolar RNA R38 [Source:RFAM;Acc:RF00213]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.98e3
  • 1.98e3
91.42
  • 91.42
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.16e3
  • 2.16e3
  • 2.56e3
90.63
  • 90.63
  • 88.89
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
2.86e3
  • 2.86e3
87.60
  • 87.60
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.51e3
  • 3.51e3
  • 6.30e3
  • 6.75e3
84.77
  • 84.77
  • 72.66
  • 70.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
3.58e3
  • 3.58e3
84.49
  • 84.49
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
3.90e3
  • 3.90e3
83.11
  • 83.11
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
4.50e3
  • 4.50e3
80.50
  • 80.50
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.04e3
  • 5.04e3
  • 5.59e3
78.13
  • 78.13
  • 75.75
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
5.29e3
  • 5.29e3
77.07
  • 77.07
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
5.47e3
  • 5.47e3
76.28
  • 76.28
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
6.29e3
  • 6.29e3
72.70
  • 72.70
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.25e3
  • 8.25e3
  • 1.08e4
64.22
  • 64.22
  • 52.97
AEIR
  • AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.17e4
  • 1.17e4
49.44
  • 49.44
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.20e4
  • 1.20e4
48.09
  • 48.09
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
34.24
  • 34.24
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.69e4
  • 1.69e4
26.85
  • 26.85
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000025962 (snoR38)

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