E. caballus Gene: U1 - ENSECAG00000025973 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000025973
NameU1
DescriptionU1 spliceosomal RNA [Source:RFAM;Acc:RF00003]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
3.05e3
  • 3.05e3
86.77
  • 86.77
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
4.88e3
  • 4.88e3
  • 6.90e3
78.84
  • 78.84
  • 70.08
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.79e4
46.20
  • 46.20
  • 22.55
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.36e4
  • 1.36e4
40.85
  • 40.85
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
35.70
  • 35.70
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
  • 2.27e4
34.64
  • 34.64
  • 1.47
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
32.07
  • 32.07
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.66e4
  • 1.66e4
28.12
  • 28.12
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.69e4
  • 1.69e4
  • 1.74e4
26.89
  • 26.89
  • 24.67
AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.75e4
  • 1.75e4
24.18
  • 24.18
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.77e4
  • 1.77e4
23.40
  • 23.40
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.81e4
  • 1.81e4
21.52
  • 21.52
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.84e4
  • 1.84e4
20.34
  • 20.34
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.91e4
  • 1.91e4
17.12
  • 17.12
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.93e4
  • 1.93e4
16.21
  • 16.21
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.94e4
  • 1.94e4
15.89
  • 15.89
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
2.01e4
  • 2.01e4
12.92
  • 12.92
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000025973 (U1)

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