E. caballus Gene: SNORD42 - ENSECAG00000025988 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000025988
NameSNORD42
DescriptionSmall nucleolar RNA SNORD42 [Source:RFAM;Acc:RF00150]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
4.11e3
  • 4.11e3
82.19
  • 82.19
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.35e3
  • 8.35e3
  • 1.08e4
  • 1.19e4
63.80
  • 63.80
  • 52.98
  • 48.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
9.03e3
  • 9.03e3
60.83
  • 60.83
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
9.11e3
  • 9.11e3
60.50
  • 60.50
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
9.84e3
  • 9.84e3
57.31
  • 57.31
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.99e3
  • 9.99e3
  • 1.18e4
56.69
  • 56.69
  • 48.85
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
54.30
  • 54.30
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.08e4
  • 1.08e4
53.11
  • 53.11
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
51.54
  • 51.54
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
  • 1.61e4
48.88
  • 48.88
  • 30.09
AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.19e4
  • 1.19e4
48.27
  • 48.27
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
39.69
  • 39.69
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.40e4
  • 1.40e4
39.47
  • 39.47
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
32.43
  • 32.43
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
32.40
  • 32.40
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000025988 (SNORD42)

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