E. caballus Gene: 5S_rRNA - ENSECAG00000026082 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000026082
Name5S_rRNA
Description5S ribosomal RNA [Source:RFAM;Acc:RF00001]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.11e3
  • 3.11e3
  • 4.52e3
86.52
  • 86.52
  • 80.42
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
3.31e3
  • 3.31e3
85.66
  • 85.66
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
6.86e3
  • 6.86e3
70.25
  • 70.25
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
9.18e3
  • 9.18e3
60.20
  • 60.20
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.79e3
  • 9.79e3
  • 1.14e4
57.53
  • 57.53
  • 50.47
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.65e4
  • 1.65e4
28.63
  • 28.63
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.65e4
  • 1.65e4
28.54
  • 28.54
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.82e4
  • 1.82e4
21.28
  • 21.28
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.89e4
  • 1.89e4
18.12
  • 18.12
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.97e4
  • 1.97e4
14.39
  • 14.39
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.99e4
  • 1.99e4
13.73
  • 13.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000026082 (5S_rRNA)

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