E. caballus Gene: U2 - ENSECAG00000026243 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000026243
NameU2
DescriptionU2 spliceosomal RNA [Source:RFAM;Acc:RF00004]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.71e3
  • 1.71e3
  • 6.05e3
92.61
  • 92.61
  • 73.77
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
2.04e3
  • 2.04e3
91.15
  • 91.15
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.09e3
  • 2.09e3
  • 9.74e3
90.93
  • 90.93
  • 57.76
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
9.81e3
  • 9.81e3
57.47
  • 57.47
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
35.35
  • 35.35
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
35.06
  • 35.06
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.60e4
  • 1.60e4
30.52
  • 30.52
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.71e4
  • 1.71e4
25.84
  • 25.84
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.71e4
  • 1.71e4
  • 2.23e4
  • 2.27e4
25.64
  • 25.64
  • 3.46
  • 1.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.82e4
  • 1.82e4
21.02
  • 21.02
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.84e4
  • 1.84e4
20.12
  • 20.12
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.90e4
  • 1.90e4
17.66
  • 17.66
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.92e4
  • 1.92e4
16.81
  • 16.81
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.95e4
  • 1.95e4
15.39
  • 15.39
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000026243 (U2)

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