E. caballus Gene: SNORD47 - ENSECAG00000026262 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000026262
NameSNORD47
DescriptionSmall nucleolar RNA SNORD47 [Source:RFAM;Acc:RF00281]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
364
  • 364
  • 606
98.43
  • 98.43
  • 97.38
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
444
  • 444
98.08
  • 98.08
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
744
  • 744
96.78
  • 96.78
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
934
  • 934
  • 4.55e3
  • 4.71e3
95.95
  • 95.95
  • 80.25
  • 79.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.80e3
  • 1.80e3
92.18
  • 92.18
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.05e3
  • 2.05e3
  • 2.14e3
91.12
  • 91.12
  • 90.71
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
2.10e3
  • 2.10e3
90.90
  • 90.90
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
3.01e3
  • 3.01e3
86.97
  • 86.97
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.31e3
  • 3.31e3
85.67
  • 85.67
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
5.60e3
  • 5.60e3
75.73
  • 75.73
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.69e3
  • 5.69e3
  • 9.70e3
75.31
  • 75.31
  • 57.92
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
6.05e3
  • 6.05e3
73.76
  • 73.76
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.01e4
  • 1.01e4
56.24
  • 56.24
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.05e4
  • 1.05e4
54.35
  • 54.35
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
36.81
  • 36.81
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000026262 (SNORD47)

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