E. caballus Gene: U6 - ENSECAG00000026359 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000026359
NameU6
DescriptionU6 spliceosomal RNA [Source:RFAM;Acc:RF00026]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.16e4
  • 1.16e4
  • 1.40e4
49.71
  • 49.71
  • 39.39
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
46.53
  • 46.53
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
36.55
  • 36.55
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.62e4
  • 1.62e4
29.69
  • 29.69
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.66e4
  • 1.66e4
28.10
  • 28.10
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.67e4
  • 1.67e4
  • 1.92e4
27.57
  • 27.57
  • 16.83
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.91e4
  • 1.91e4
17.31
  • 17.31
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
2.01e4
  • 2.01e4
12.64
  • 12.64
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
2.10e4
  • 2.10e4
9.11
  • 9.11
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000026359 (U6)

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