E. caballus Gene: U1 - ENSECAG00000026451 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000026451
NameU1
DescriptionU1 spliceosomal RNA [Source:RFAM;Acc:RF00003]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
7.00
  • 7.00
  • 8.35
99.97
  • 99.97
  • 99.97
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
10.4
  • 10.4
99.96
  • 99.96
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
36.3
  • 36.3
99.85
  • 99.85
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
37.0
  • 37.0
  • 5.84e3
99.84
  • 99.84
  • 74.69
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.11e3
  • 1.11e3
  • 2.82e3
  • 7.02e3
95.18
  • 95.18
  • 87.79
  • 69.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
4.52e3
  • 4.52e3
80.41
  • 80.41
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
5.18e3
  • 5.18e3
77.56
  • 77.56
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
5.66e3
  • 5.66e3
75.47
  • 75.47
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.06e3
  • 6.06e3
  • 8.29e3
73.74
  • 73.74
  • 64.05
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
7.43e3
  • 7.43e3
67.76
  • 67.76
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
8.55e3
  • 8.55e3
62.94
  • 62.94
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
8.59e3
  • 8.59e3
62.75
  • 62.75
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
9.40e3
  • 9.40e3
59.25
  • 59.25
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
51.33
  • 51.33
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
49.88
  • 49.88
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
44.51
  • 44.51
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.30e4
  • 1.30e4
  • 1.69e4
43.56
  • 43.56
  • 26.89
AEIR
  • AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
35.70
  • 35.70
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
35.36
  • 35.36
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.94e4
  • 1.94e4
15.89
  • 15.89
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000026451 (U1)

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