E. caballus Gene: SNORD42 - ENSECAG00000026505 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000026505
NameSNORD42
DescriptionSmall nucleolar RNA SNORD42 [Source:RFAM;Acc:RF00150]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.73e3
  • 5.73e3
  • 8.00e3
  • 1.12e4
75.16
  • 75.16
  • 65.29
  • 51.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
5.84e3
  • 5.84e3
74.67
  • 74.67
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
6.10e3
  • 6.10e3
73.53
  • 73.53
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.86e3
  • 6.86e3
  • 9.71e3
70.25
  • 70.25
  • 57.89
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
8.06e3
  • 8.06e3
65.03
  • 65.03
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.52e3
  • 8.52e3
63.07
  • 63.07
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
9.62e3
  • 9.62e3
58.26
  • 58.26
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.07e4
  • 1.07e4
53.77
  • 53.77
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.07e4
  • 1.07e4
53.42
  • 53.42
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
51.93
  • 51.93
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.25e4
  • 1.25e4
45.79
  • 45.79
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
1.27e4
  • 1.27e4
44.72
  • 44.72
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.38e4
  • 1.38e4
  • 1.76e4
40.06
  • 40.06
  • 23.50
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
33.98
  • 33.98
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.74e4
  • 1.74e4
24.48
  • 24.48
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000026505 (SNORD42)

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