E. caballus Gene: U2 - ENSECAG00000026524 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000026524
NameU2
DescriptionU2 spliceosomal RNA [Source:RFAM;Acc:RF00004]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
50.0
  • 50.0
  • 63.4
99.79
  • 99.79
  • 99.73
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
121
  • 121
99.48
  • 99.48
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.30e3
  • 1.30e3
  • 1.08e4
94.36
  • 94.36
  • 53.37
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
2.80e3
  • 2.80e3
87.85
  • 87.85
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
6.21e3
  • 6.21e3
  • 2.27e4
73.08
  • 73.08
  • 1.47
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
8.07e3
  • 8.07e3
65.02
  • 65.02
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.38e3
  • 8.38e3
  • 9.93e3
63.66
  • 63.66
  • 56.92
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
45.98
  • 45.98
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
43.16
  • 43.16
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
40.67
  • 40.67
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.40e4
  • 1.40e4
39.30
  • 39.30
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
35.43
  • 35.43
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
35.07
  • 35.07
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
34.24
  • 34.24
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
31.85
  • 31.85
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.58e4
  • 1.58e4
31.41
  • 31.41
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.72e4
  • 1.72e4
25.44
  • 25.44
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.72e4
  • 1.72e4
25.26
  • 25.26
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.74e4
  • 1.74e4
  • 1.82e4
24.69
  • 24.69
  • 21.24
AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.90e4
  • 1.90e4
17.47
  • 17.47
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.96e4
  • 1.96e4
15.05
  • 15.05
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000026524 (U2)

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