E. caballus Gene: U6 - ENSECAG00000026549 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000026549
NameU6
DescriptionU6 spliceosomal RNA [Source:RFAM;Acc:RF00026]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.16e3
  • 8.16e3
  • 1.80e4
64.63
  • 64.63
  • 22.05
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
  • 1.62e4
  • 2.27e4
50.52
  • 50.52
  • 29.80
  • 1.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.18e4
  • 1.18e4
  • 1.84e4
49.02
  • 49.02
  • 20.40
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
47.19
  • 47.19
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
35.38
  • 35.38
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
33.05
  • 33.05
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.58e4
  • 1.58e4
31.34
  • 31.34
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
29.86
  • 29.86
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.75e4
  • 1.75e4
23.99
  • 23.99
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.78e4
  • 1.78e4
  • 1.82e4
22.67
  • 22.67
  • 21.05
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.78e4
  • 1.78e4
22.65
  • 22.65
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.90e4
  • 1.90e4
17.65
  • 17.65
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.96e4
  • 1.96e4
15.06
  • 15.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000026549 (U6)

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