E. caballus Gene: SNORA55 - ENSECAG00000026616 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000026616
NameSNORA55
DescriptionSmall nucleolar RNA SNORA55 [Source:RFAM;Acc:RF00431]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
4.67e3
  • 4.67e3
79.75
  • 79.75
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
5.30e3
  • 5.30e3
77.02
  • 77.02
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
5.95e3
  • 5.95e3
74.20
  • 74.20
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
6.68e3
  • 6.68e3
71.02
  • 71.02
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.85e3
  • 6.85e3
  • 8.19e3
70.29
  • 70.29
  • 64.49
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
7.29e3
  • 7.29e3
  • 1.10e4
68.40
  • 68.40
  • 52.39
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.88e3
  • 8.88e3
  • 9.02e3
  • 1.19e4
61.51
  • 61.51
  • 60.90
  • 48.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
9.80e3
  • 9.80e3
57.51
  • 57.51
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.02e4
  • 1.02e4
55.61
  • 55.61
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.40e4
  • 1.40e4
39.19
  • 39.19
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.44e4
  • 1.44e4
  • 1.62e4
37.67
  • 37.67
  • 29.58
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
36.19
  • 36.19
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
32.79
  • 32.79
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.73e4
  • 1.73e4
24.84
  • 24.84
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.88e4
  • 1.88e4
18.46
  • 18.46
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000026616 (SNORA55)

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