E. caballus Gene: LYRM4 - ENSECAG00000026824 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000026824
NameLYRM4
DescriptionLYR motif containing 4 [Source:HGNC Symbol;Acc:HGNC:21365]
OrganismEquus caballus (horse)
Synonym(s)c6orf149, cgi-203, isd11

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
377
  • 377
  • 1.05e3
  • 1.29e3
  • 5.01e3
98.37
  • 98.37
  • 95.47
  • 94.41
  • 78.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
576
  • 576
97.51
  • 97.51
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
688
  • 688
97.02
  • 97.02
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
744
  • 744
  • 825
96.78
  • 96.78
  • 96.43
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
872
  • 872
  • 1.67e3
96.22
  • 96.22
  • 92.75
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
938
  • 938
95.94
  • 95.94
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.51e3
  • 1.51e3
93.46
  • 93.46
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.54e3
  • 1.54e3
93.33
  • 93.33
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.76e3
  • 1.76e3
92.38
  • 92.38
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
2.02e3
  • 2.02e3
91.23
  • 91.23
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
2.09e3
  • 2.09e3
90.92
  • 90.92
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
2.15e3
  • 2.15e3
90.68
  • 90.68
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.30e3
  • 2.30e3
  • 2.32e3
90.01
  • 90.01
  • 89.95
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
2.45e3
  • 2.45e3
89.36
  • 89.36
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.71e3
  • 2.71e3
  • 2.84e3
88.26
  • 88.26
  • 87.69
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
3.09e3
  • 3.09e3
86.60
  • 86.60
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
3.19e3
  • 3.19e3
86.18
  • 86.18
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.26e3
  • 3.26e3
  • 4.50e3
85.85
  • 85.85
  • 80.47
AEIR
  • AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
3.38e3
  • 3.38e3
85.36
  • 85.36
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
3.49e3
  • 3.49e3
84.88
  • 84.88
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
4.10e3
  • 4.10e3
82.24
  • 82.24
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
6.08e3
  • 6.08e3
73.64
  • 73.64
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000026824 (LYRM4)
HGNCHGNC:21365 (LYRM4)
Uniprot/SPTREMBLF6PVA7, F6PVA7_HORSE

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