E. caballus Gene: LYPD1 - ENSECAG00000026896 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000026896
NameLYPD1
DescriptionLY6/PLAUR domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28431]
OrganismEquus caballus (horse)
Synonym(s)lypdc1, mgc29643

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
5.81e3
  • 5.81e3
74.79
  • 74.79
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
6.35e3
  • 6.35e3
72.46
  • 72.46
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
8.26e3
  • 8.26e3
64.18
  • 64.18
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
8.31e3
  • 8.31e3
  • 9.08e3
63.98
  • 63.98
  • 60.64
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
8.55e3
  • 8.55e3
  • 1.03e4
62.94
  • 62.94
  • 55.13
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
8.64e3
  • 8.64e3
62.55
  • 62.55
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
9.04e3
  • 9.04e3
60.81
  • 60.81
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
50.72
  • 50.72
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
  • 1.29e4
  • 1.35e4
  • 1.36e4
48.08
  • 48.08
  • 43.90
  • 41.65
  • 41.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
45.55
  • 45.55
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
43.11
  • 43.11
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
42.34
  • 42.34
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.34e4
  • 1.34e4
  • 1.41e4
41.70
  • 41.70
  • 38.89
AEIR
  • AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
37.46
  • 37.46
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.50e4
  • 1.50e4
35.07
  • 35.07
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.53e4
  • 1.53e4
33.61
  • 33.61
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.83e4
  • 1.83e4
20.59
  • 20.59
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000026896 (LYPD1)
HGNCHGNC:28431 (LYPD1)
Uniprot/SPTREMBLF6R194, F6R194_HORSE

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