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E. caballus Gene: RPL28 - ENSECAG00000026938 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000026938
NameRPL28
Descriptionribosomal protein L28 [Source:HGNC Symbol;Acc:HGNC:10330]
OrganismEquus caballus (horse)
Synonym(s)flj43307, l28
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
17.1
  • 17.1
99.93
  • 99.93
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
19.3
  • 19.3
99.92
  • 99.92
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
62.5
  • 62.5
  • 69.0
99.73
  • 99.73
  • 99.71
AEIR
  • AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
62.7
  • 62.7
99.73
  • 99.73
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000113post-juvenile adult stage
62.8
  • 62.8
99.73
  • 99.73
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
66.7
  • 66.7
  • 258
  • 319
  • 336
99.72
  • 99.72
  • 98.89
  • 98.62
  • 98.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
74.7
  • 74.7
99.68
  • 99.68
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
77.4
  • 77.4
99.67
  • 99.67
AEIR
  • AEIR
UBERON:0010996articular cartilage of joint
  • UBERON:0018241prime adult stage
80.2
  • 80.2
99.66
  • 99.66
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
82.1
  • 82.1
99.65
  • 99.65
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
118
  • 118
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
121
  • 121
99.48
  • 99.48
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
134
  • 134
99.42
  • 99.42
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
143
  • 143
99.38
  • 99.38
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
153
  • 153
99.34
  • 99.34
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
181
  • 181
99.22
  • 99.22
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
196
  • 196
  • 226
99.15
  • 99.15
  • 99.02
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
214
  • 214
99.08
  • 99.08
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
218
  • 218
  • 246
99.06
  • 99.06
  • 98.94
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
272
  • 272
  • 338
98.83
  • 98.83
  • 98.54
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
304
  • 304
98.69
  • 98.69
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
321
  • 321
98.61
  • 98.61
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
346
  • 346
  • 398
98.50
  • 98.50
  • 98.28
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species14 genesCompare expression
Theria12 species15 genesCompare expression
Amniota13 species16 genesCompare expression
Tetrapoda14 species17 genesCompare expression
Euteleostomi15 species18 genesCompare expression
Bilateria22 species25 genesCompare expression

Orthology information comes from OMA : ENSECAG00000026938.

Cross-references

EnsemblENSECAG00000026938 (RPL28)
HGNCHGNC:10330 (RPL28)
Uniprot/SPTREMBLH9H036, H9H036_HORSE

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